Selected publications

GIGANTEA adjusts the response to shade at dusk by directly impinging on PHYTOCHROME INTERACTING FACTOR 7 function.

Martínez-Vasallo C, Cole B, Pérez-Alemany J, Ortiz-Ramírez CI, Gallego-Bartolomé J, Chory J, Kay SA, Nohales MA.

Proc Natl Acad Sci U S A. 2024 Jul 23;121(30):e2315778121. doi: 10.1073/pnas.2315778121. 

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The plant POLYMERASE ASSOCIATED FACTOR1 complex links transcription and H2B monoubiquitination genome-wide.

Blanco-Touriñán N* , Pérez-Alemany J* , Bourbousse C, Latrasse D, Ait-Mohamed O, Benhamed M, Barneche F, Blázquez MA, Gallego-Bartolomé J, Alabadí D.

Plant Physiol. 2024 Jan 29:kiae041. doi: 10.1093/plphys/kiae041.

* Equal contribution

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Mind the gap: Epigenetic regulation of chromatin accessibility in plants.

Candela-Ferre* J, Diego-Martin B*, Pérez-Alemany J, Gallego-Bartolomé J.

Plant Physiol. 2024 Mar 29;194(4):1998-2016. doi: 10.1093/plphys/kiae024.

* Equal contribution

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The TRIPLE PHD FINGERS proteins are required for SWI/SNF complex-mediated+ 1 nucleosome positioning and transcription start site determination in Arabidopsis

Borja Diego-Martin*, Jaime Pérez-Alemany*, Joan Candela-Ferre, Antonio Corbalán-Acedo, Juan Pereyra, David Alabadí, Yasaman Jami-Alahmadi, James Wohlschlegel, Javier Gallego-Bartolomé

Nuclei Acids Research 2022 Oct 14;50(18) 10399-10417

* Equal contribution

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Comprehensive identification of SWI/SNF complex subunits underpins deep eukaryotic ancestry and reveals new plant components

Jorge Hernández-García, Borja Diego-Martin, Peggy Hsuanyu Kuo, Yasaman Jami-Alahmadi, Ajay A Vashisht, James Wohlschlegel, Steven E Jacobsen, Miguel A Blázquez, Javier Gallego-Bartolomé

Communications Biology 5 (1), 1-11

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DNA methylation in plants: mechanisms and tools for targeted manipulation.

Gallego-Bartolomé J. 

New Phytol. (2020) Jul;227(1):38-44.

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CryoEM structures of Arabidopsis DDR complexes involved in RNA-directed DNA methylation.

Wongpalee SP*, Liu S*, Gallego-Bartolomé J*, Leitner A, Aebersold R, Liu W, Yen L, Nohales MA, Kuo PH, Vashist AA, Wohlschlegel JA,

Feng S, Kay SA, Zhou ZH, Jacobsen SE.

Nat. Commun. (2019) 10, 3916. 

* Equal contribution

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Site-specific manipulation of Arabidopsis loci using CRISPR-Cas9 SuTag systems.

Papikian A, Liu S, Gallego-Bartolomé J, Jacobsen SE.

Nat. Commun (2019) 13, 729. 

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Co-targeting RNA Polymerases IV and V promotes efficient de novo DNA methylation in Arabidopsis.

Gallego-Bartolomé J*, Liu W*, Kuo PH, Feng S, Ghoshal B, Gardiner J, Zhao JM, Park SY, Chory J, Jacobsen SE.

Cell (2019) 176, 1068-1082.

* Equal contribution

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Targeted DNA demethylation of the Arabidopsis genome using the human TET1 catalytic domain.

Gallego-Bartolomé J*, Gardiner J*, Liu W*, Papikian A*, Ghoshal B, Kuo HY, Zhao JM, Segal DJ, Jacobsen SE.

Proc. Natl. Acad. Sci. USA (2017) 115, E2125-E2134. 

* Equal contribution

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